USC-OGP 2-DE database Two-dimensional polyacrylamide gel electrophoresis database

USC-OGP 2-DE database  Search by                Maps             Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal World-2DPAGE Repository Exclude local DBs has only effect if a remote interface is selected

Searching in 'USC-OGP 2-DE database' for entry matching: EFTU_HUMAN USC-OGP 2-DE database:  EFTU_HUMAN EFTU_HUMAN General information about the entry View entry in simple text format Entry name EFTU_HUMAN Primary accession number P49411 integrated into USC-OGP 2-DE database on  January 17, 2017 (release 1) 2D Annotations were last modified on January 17, 2017 (version 1) General Annotations were last modified on  April 5, 2017 (version 2) Name and origin of the protein Description RecName: Full=Elongation factor Tu, mitochondrial; Short=EF-Tu; AltName: Full=P43; Flags: Precursor;. Gene name Name=TUFM Annotated species Homo sapiens (Human) [TaxID: 9606] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. References [1]   2D GEL CHARACTERIZATION Author 1., Author 2. Submitted (Mar-2011) to Current 2D PAGE maps for identified proteins How to interpret a protein PLATELET_4-7 {PLATELET 4-7} Homo sapiens (Human)   map experimental info   PLATELET_4-7 MAP LOCATIONS: SPOT OGP-0404: pI=6.45; Mw=44449 UVEAL_MELANOMA_3-10 {UVEAL MELANOMA 3-10} Homo sapiens (Human)   map experimental info   UVEAL_MELANOMA_3-10 MAP LOCATIONS: SPOT OGP-1183: pI=6.84; Mw=44152 Cross-references UniProtKB/Swiss-Prot P49411; EFTU_HUMAN. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 0.0 Entry name EFTU_HUMAN Primary accession number P49411 Secondary accession number(s) O15276 Sequence was last modified on  October 1, 1996 (version 2) Annotations were last modified on  March 15, 2017 (version 183) Name and origin of the protein Description RecName: Full=Elongation factor Tu, mitochondrial; Short=EF-Tu; AltName: Full=P43; Flags: Precursor; Gene name Name=TUFM Encoded on Name=TUFM Keywords Acetylation; Complete proteome; Direct protein sequencing; Disease mutation; Elongation factor; GTP-binding; Mitochondrion; Nucleotide-binding; Phosphoprotein; Protein biosynthesis; Reference proteome; Transit peptide. Copyright Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL L38995; AAB00499.1; -; mRNA EMBL S75463; AAC60647.1; ALT_INIT; mRNA EMBL X84694; CAA59169.1; -; mRNA EMBL AC133550; -; NOT_ANNOTATED_CDS; Genomic_DNA EMBL BC001633; AAH01633.2; ALT_INIT; mRNA EMBL BC010041; AAH10041.2; ALT_INIT; mRNA EMBL Y11797; CAA72493.1; -; Genomic_DNA PIR S62767; S62767; . PIR S68466; S68466; . RefSeq NP_003312.3; NM_003321.4; . RefSeq XP_016879108.1; XM_017023619.1; . UniGene Hs.12084; -; . ProteinModelPortal P49411; -; . SMR P49411; -; . BioGrid 113135; 169; . IntAct P49411; 37; . MINT MINT-224570; -; . STRING 9606.ENSP00000322439; -; . DrugBank DB04315; Guanosine-5'-Diphosphate; . iPTMnet P49411; -; . PhosphoSitePlus P49411; -; . SwissPalm P49411; -; . BioMuta TUFM; -; . DMDM 1706611; -; . DOSAC-COBS-2DPAGE P49411; -; . OGP P49411; -; . REPRODUCTION-2DPAGE IPI00027107; -; . SWISS-2DPAGE P49411; -; . UCD-2DPAGE P49411; -; . EPD P49411; -; . MaxQB P49411; -; . PaxDb P49411; -; . PeptideAtlas P49411; -; . PRIDE P49411; -; . TopDownProteomics P49411; -; . DNASU 7284; -; . Ensembl ENST00000313511; ENSP00000322439; ENSG00000178952; . GeneID 7284; -; . KEGG hsa:7284; -; . UCSC uc002drh.2; human; . CTD 7284; -; . DisGeNET 7284; -; . GeneCards MIR4721; -; . GeneCards TUFM; -; . HGNC HGNC:12420; TUFM; . HPA CAB075730; -; . HPA CAB075731; -; . HPA HPA018991; -; . HPA HPA024087; -; . MalaCards TUFM; -; . MIM 602389; gene; . MIM 610678; phenotype; . neXtProt NX_P49411; -; . Orphanet 254925; Combined oxidative phosphorylation defect type 4; . PharmGKB PA37082; -; . eggNOG KOG0460; Eukaryota; . eggNOG COG0050; LUCA; . HOGENOM HOG000229290; -; . HOVERGEN HBG001535; -; . InParanoid P49411; -; . KO K02358; -; . OrthoDB EOG091G0BFD; -; . PhylomeDB P49411; -; . TreeFam TF300432; -; . Reactome R-HSA-5389840; Mitochondrial translation elongation; . SignaLink P49411; -; . GeneWiki TUFM; -; . GenomeRNAi 7284; -; . PRO PR:P49411; -; . Proteomes UP000005640; Chromosome 16; . Bgee ENSG00000178952; -; . CleanEx HS_TUFM; -; . ExpressionAtlas P49411; baseline and differential; . Genevisible P49411; HS; . GO GO:0070062; C:extracellular exosome; IDA:UniProtKB; . GO GO:0016020; C:membrane; IDA:UniProtKB; . GO GO:0005743; C:mitochondrial inner membrane; IEA:Ensembl; . GO GO:0042645; C:mitochondrial nucleoid; IDA:BHF-UCL; . GO GO:0005739; C:mitochondrion; IDA:UniProtKB; . GO GO:0043209; C:myelin sheath; IEA:Ensembl; . GO GO:0005525; F:GTP binding; IEA:UniProtKB-KW; . GO GO:0003924; F:GTPase activity; IEA:InterPro; . GO GO:0003723; F:RNA binding; IDA:UniProtKB; . GO GO:0003746; F:translation elongation factor activity; IDA:UniProtKB; . GO GO:0045471; P:response to ethanol; IEA:Ensembl; . GO GO:0006414; P:translational elongation; IDA:UniProtKB; . CDD cd03697; EFTU_II; 1; . Gene3D 3.40.50.300; -; 1; . InterPro IPR004161; EFTu-like_2; . InterPro IPR033720; EFTU_2; . InterPro IPR031157; G_TR_CS; . InterPro IPR027417; P-loop_NTPase; . InterPro IPR000795; TF_GTP-bd_dom; . InterPro IPR009000; Transl_B-barrel; . InterPro IPR009001; Transl_elong_EF1A/Init_IF2_C; . InterPro IPR004541; Transl_elong_EFTu/EF1A_bac/org; . InterPro IPR004160; Transl_elong_EFTu/EF1A_C; . Pfam PF03144; GTP_EFTU_D2; 1; . Pfam PF03143; GTP_EFTU_D3; 1; . PRINTS PR00315; ELONGATNFCT; . SUPFAM SSF50447; SSF50447; 1; . SUPFAM SSF50465; SSF50465; 1; . SUPFAM SSF52540; SSF52540; 1; . TIGRFAMs TIGR00485; EF-Tu; 1; . PROSITE PS00301; G_TR_1; 1; . PROSITE PS51722; G_TR_2; 1; .

Gateways to other related servers

• The World-2DPAGE Constellation - Entry point to the world-wide 2-DPAGE resources.
• World-2DPAGE Repository - A public repository for gel-based proteomics data linked to protein identification published in the literature.
• World-2DPAGE Portal - A dynamic portal to query simultaneously world-wide gel-based proteomics databases.
• SWISS-2DPAGE - The Geneva Two-dimensional polyacrylamide gel electrophoresis database.
• ExPASy - The resources web server of the Swiss Institute of Bioinformatics

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